Thursday, May 22, 2014

HPDA Orchestrator - Platform LSF

With the success of applying Platform Computing stack to genomics and growing number of scientific disciplines and other fields such as big data analytics, I was frequently asked about the scope and efforts it will take to migrate to or adopt Platform LSF. Below I will compile some documentation and best practice as a reference point:

PBS/Torque to LSF Migration Manual
This is a useful document showing how Durham University migrated from PBS/Torque to LSF. The manual was originally from here

LSF Migration Guide
This is a quick reference to assist system administrator or application support staff in converting MOAB scripts to LSF scripts

Download LSF DRMAA

The latest Platform LSF version has support for DRMAA, which can be downloaded in the link above.
 
If you have produced similar documentation and would like to share with the scientific community, please send it to me at drfranknlee@gmail.com

No comments:

Post a Comment